PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g427950.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 1149aa MW: 128269 Da PI: 8.8355 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.1 | 4.7e-09 | 30 | 65 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a+ + +R+ +++ Pd.00g427950.m01 30 QWTKEELENFYEAYRKYGKD-WKKVASVVC-HRSVEMV 65 6*****************99.******999.9998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1149 aa Download sequence |
MNEAASNKYG ENANKTGQKK RKLSDMLGPQ WTKEELENFY EAYRKYGKDW KKVASVVCHR 60 SVEMVEALYS MNKAYLSLPE GVASVVGLIA MMTGHYCILG GSDSEQENNE DAETSRKPQK 120 HARSKLRSES SKGLEGHIPD FSESHPMAST SDCLSLLKNR RSGIRPHAVK KRTPRVPVAY 180 SNDQDNSRKY SSPARQGLKL NADANNNDVA HEIALALTEA SHRGGSPLVS WTPKRKAKGT 240 TPSPVRNGER MCAESEMTNA RLHGCEMDEG GCELSLGSTE ADNDYYDRNE KYAMGREGTG 300 TLEVQQRRKR YFVKKKEVDE SKNKHVEDIK EACSGTEEGQ KLVAIKGKLD TKVVKSARSF 360 YKDTRKKSKK ALIGGDEGSP FDALQTLADL SLMMPEAADT ESSAHVKEDN FNIANKSKLK 420 GSRPIPGVEH AAFKTSKLGK LGEGVHQSNS GLQKGKQNSL SFKIYNEAQT DCYATDNEKI 480 EATVEVKKSA SKGKRSSHYT MHPKQGKLVK KTLWNASSTT DRKREENDSG LSTVQVRSAN 540 PANLPTKNKG KWEDMQKSSI QKDTKSPESI LDDQPDRLVP SFRNRELNIK EKLSSCLSRY 600 QVRRWCAFEW FYSAIDYPWF AKREFVEYLD HVGLGHVPRL TRVEWGVIRS SLGRPRRFSE 660 QFLKEEKEKL NQYRESVRTH YAELNAGTRE GLPTDLARPL SVGQHVIAFH PRAREIHNGI 720 VLTVDHSRCS VQFDQPELGV EYIMDVDCMP LHPAENLPAS FRKHNVTVNK YIENLKELKI 780 NEQLKEGTTK GYMKISSSDK LVSTGVPGYI LPSNHRINKS SKQTGVKSSS FNVQAKVGPG 840 ETASTQVANY QPSIPAQTQA KEADVQAIYE LTRALDKKEA VVSELRRMND EVFENQRDED 900 NSIRDSEPFK KEYAAVLLQL SQVNDQVSSA LLCLRQRNTY RGSSPHTVVK PMDNLSGPVS 960 HSNSYGYSCD VQESASHMRE IVESSRAKAH KMVDAAMQAF SSLRKENNFD KIEEVIDFVS 1020 NRLSDDVGML AMGSSTTPAD PIPFSQDQLT SCTSKPLATG CAHDPPKSNN LSNQSEEKLL 1080 SDLIVNCVAA FMMIQTCTAR QFPPADVAQV LDHAVTSLQP FCPQNLSVYG EIQKCMGIIR 1140 NQIMALVPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |