PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g427920.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 363aa    MW: 39948.8 Da    PI: 5.9421
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g427920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.2e-185199355
               AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      + GVr+++ +gr++AeIrdps+   + r++lg+f+ta+eAa a+++a+++++g
  Pd.00g427920.m01 51 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAQEAALAYDRAALSMKG 99
                      56******.**********965...5************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MSTSKTSDKP FKAYEQGQAQ MGFASVLQRN TPPSQSGERR GRRKQAEPGR FLGVRRRPWG  60
RYAAEIRDPS TKERHWLGTF DTAQEAALAY DRAALSMKGS QARTNFIYSD NTTFHSLLTP  120
FDLQTLLPQQ SQFFSAAKQQ PTNHNSPPRQ SGIFQNDQTQ NPNIRSNNIN TCGAETSHGS  180
SAHDGDDDGF FFSNGSNSNS GYLACIVPDN CLRPPSESDH HATNHRSSKT CDFNIDQDCS  240
FANTNSIETK SHCLDVMNVQ PALMSSNTNP PGDQLPSFDG FSHGFWDNQQ PIWELHSREL  300
SAAMVDNPFM IEDGCMGGGA LYPIVENSSF GLIPQATTSS SFSCSPSVPP FGDAVFEFGQ  360
SLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.13e-51ERF family protein