PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g424400.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 352aa MW: 39214.1 Da PI: 6.1912 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.3 | 1.2e-20 | 199 | 249 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp + + r++lg+f+ta eAaka+++a+ kl+g Pd.00g424400.m01 199 HYRGVRQRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAIEAAKAYDRAAFKLRG 249 8********.**********9...4334*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MALSSDMAGL DQVSALELIK NHLLGEFSPA AKSSVTELSD SASSFPQNQW SPEANSDLSR 60 SQSDSLCSKS SSTFDSSIEI SDYLNSNAIF EFEFNSTDFL DFEAKPQVID LTTPKSANLR 120 SQNSFEFESK PQISDDFFEF EQKPQILNRT APKPANPTRK PALTVSLPNK TEWIHFASSE 180 PAVKAPVQKS SSNEEKKKHY RGVRQRPWGK YAAEIRDPNR RGSRVWLGTF DTAIEAAKAY 240 DRAAFKLRGS KAILNFPLEA GKAEPVVAVQ RKRRREEDRE EVKAVAVAVK KERLTEAPEA 300 VGCIKDMPLT PSSWMAFWDS ESFEDVKGIF SVPPLSPLSP HPTMGYPQLM VV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 271 | 275 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47230.1 | 9e-61 | ERF family protein |