PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g424390.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 282aa    MW: 30191.1 Da    PI: 8.7932
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g424390.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-19148198255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  Pd.00g424390.m01 148 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 198
                       8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MYGQSGTDAD ITLLDSIRRH LLGETDLRIG NSMANSVTGP IFSRSSSFSS LYPCLTENWG  60
DLPLKEDDSE DMVLYGVLRD AVNVGWVPSL GSGSADTCSL NFSVKSEPEV LTPVSEVPEK  120
KPAPVQPVRP AKQPAQAGPA VVPAKGKHYR GVRQRPWGKF AAEIRDPAKN GARVWLGTFE  180
TAEDAALAYD RAAYRMRGSR ALLNFPLRVN SGEPDPIRVT SKRSSPEPSS SSSESGSPKR  240
RKKVAVLDPA QAGLEMGAGI GQQQVGGQVV VSCTRGEQLL VS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238244PKRRKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-66ERF family protein