PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g424350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 254aa    MW: 29323 Da    PI: 5.9864
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g424350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.91.4e-092167153
               AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkl 53
                      s++kGV+  k +g W A+I   +      k ++lg +  +eeAa a+++a+ kl
  Pd.00g424350.m01 21 SRFKGVSLLK-SGNWGARISYmY------KPYWLGAYQMEEEAAIAYDRAAVKL 67
                      789*****99.7******87733......**********************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MEAEFVSESR VDMVLQRGPS SRFKGVSLLK SGNWGARISY MYKPYWLGAY QMEEEAAIAY  60
DRAAVKLQRG DTPLNFHWSK YSAEESIFQS QYSTEEILST LKDKTYSSKL MNFLSRHSSG  120
LGTRTTTFMN EQGISYHFLF QKELTHRDVT HKCFLIPREF SFRCLPPPEG IINAGEDEAR  180
MNNLNQKDIV MFYRCEYEGE VLGREVYMID YQRSNGENYV LEHSSGSSTI ELEADCKEKE  240
TKKGFKLFGV EING
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51120.13e-24RAV family protein