PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g424000.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GATA | ||||||||
Protein Properties | Length: 333aa MW: 37013.1 Da PI: 8.4685 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.9 | 6.5e-19 | 25 | 58 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+ C+tt+TplWR gp g++tLCnaCG++yrk++ Pd.00g424000.m01 25 CTDCHTTTTPLWRGGPAGPRTLCNACGIKYRKRK 58 ********************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MDQRQKRSEA EHMNQSSIAP PSKSCTDCHT TTTPLWRGGP AGPRTLCNAC GIKYRKRKRA 60 LVVAAAVAPR SRSVWVLSNQ SQSLRPGHAS AMASRPADPA LHAGDYEADP VVTTGDPQAT 120 ENVAEEKPAF DEQQRQVDKP PSSWGKGKGT GTEPVSPTNK PSYPNASFPR LEKTDVTLQP 180 DPSDHPINYT QKRRASQYAT AATGLSLENF DLEKVSCVGL DGTPWPRDKE NEEHKTDRDR 240 EDEREYYKHH KASPLSEIEF ADTRKPITRV MHGTAAVSEY GAGRDVIRWR PEQLDTAEEA 300 LRRAARIWKE NAMRGDPDAP HSRVLRALRG ESF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49300.1 | 3e-15 | GATA family protein |