PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g421790.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 363aa MW: 40193.3 Da PI: 6.8753

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g421790.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.6	8e-12	186	232	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + kK++Ka++L A++++k+Lq Pd.00g421790.m01 186 EHIMAERKRREKLSERFIALSAIVPGL-----KKMDKASVLADAIKHVKQLQ 232 699**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MDISSAKWFS ELGIDDYNFI PQCDLNTLDE GFTAQDIATA LGENFKQSLS SESYSSYPTL 60 TTQNTKTTTT TLSGGSSINK TSQTSFERPA KQLKTSNWNS GITEHVSPKP SSSSSQILSF 120 ESSSSPSSKP QHFCNNFDST LKPKDEAPSQ INMQFSPLIS KSSIKDCSQG TKRPYSITRT 180 PSHAQEHIMA ERKRREKLSE RFIALSAIVP GLKKMDKASV LADAIKHVKQ LQERVKVLEE 240 QTKKRTVESV VFVKKSQLSA DDGTSSCDES FDGHSDEASL PEIEAKVSET DVLIRIHCEK 300 QKGFVVKILS EVEKLQLSVV NSSILPFGNS ALDITIIAQM EDEFNMSVKD LARNLRVALL 360 KFM

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MDISSAKWFS ELGIDDYNFI PQCDLNTLDE GFTAQDIATA LGENFKQSLS SESYSSYPTL  60
TTQNTKTTTT TLSGGSSINK TSQTSFERPA KQLKTSNWNS GITEHVSPKP SSSSSQILSF  120
ESSSSPSSKP QHFCNNFDST LKPKDEAPSQ INMQFSPLIS KSSIKDCSQG TKRPYSITRT  180
PSHAQEHIMA ERKRREKLSE RFIALSAIVP GLKKMDKASV LADAIKHVKQ LQERVKVLEE  240
QTKKRTVESV VFVKKSQLSA DDGTSSCDES FDGHSDEASL PEIEAKVSET DVLIRIHCEK  300
QKGFVVKILS EVEKLQLSVV NSSILPFGNS ALDITIIAQM EDEFNMSVKD LARNLRVALL  360
KFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	191	196	ERKRRE
2	192	197	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-70	bHLH family protein