PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g416650.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 169aa    MW: 19369.7 Da    PI: 9.6115
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g416650.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.67.2e-3091148159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+vk+s+fp sYYrCt++gC vkk+v+r ++d+++v++tYeg H h+
  Pd.00g416650.m02  91 LDDGYRWRKYGQKTVKNSKFP-SYYRCTHQGCIVKKQVQRLSKDEEIVVTTYEGIHSHP 148
                       59*******************.9***********************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MEHNQILFLA LPKSSDSASP NLSSNPSNIS QVFPRFHFDS AGLMKNEAKI YQHCGTSYGS  60
VDKMKSGKKE GGKETKKHKY AFQTRSQVDI LDDGYRWRKY GQKTVKNSKF PSYYRCTHQG  120
CIVKKQVQRL SKDEEIVVTT YEGIHSHPTD ETSAENFDQI LRHLQTYNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.14e-45WRKY family protein