PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g416650.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 170aa    MW: 19525.9 Da    PI: 9.7455
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g416650.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.23.4e-3391149159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+vk+s+fprsYYrCt++gC vkk+v+r ++d+++v++tYeg H h+
  Pd.00g416650.m01  91 LDDGYRWRKYGQKTVKNSKFPRSYYRCTHQGCIVKKQVQRLSKDEEIVVTTYEGIHSHP 149
                       59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MEHNQILFLA LPKSSDSASP NLSSNPSNIS QVFPRFHFDS AGLMKNEAKI YQHCGTSYGS  60
VDKMKSGKKE GGKETKKHKY AFQTRSQVDI LDDGYRWRKY GQKTVKNSKF PRSYYRCTHQ  120
GCIVKKQVQR LSKDEEIVVT TYEGIHSHPT DETSAENFDQ ILRHLQTYNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.19e-48WRKY family protein