PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g415990.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 248aa MW: 28663.6 Da PI: 6.312 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 47.8 | 2.7e-15 | 28 | 114 | 7 | 99 |
.-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++ ++ l++pk+f++++ + + s ++ l+ + g +We+kl r++ g+ +++kGW eF + Lk g +++F+++g+s+f +v +f++ Pd.00g415990.m01 28 ADETSGNKTLRVPKTFLDKCAE--HLSDQIHLKLPCGSEWEIKL--RRCNGEAWFGKGWPEFSEFYSLKKGNSLLFRYEGNSKF--NVLIFDE 114 555667789***********74..47789***************..**********************************9999..9999986 PP | |||||||
2 | B3 | 49.9 | 5.6e-16 | 167 | 247 | 13 | 98 |
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + + +p +f ++++ e+ +++ rsW vkli++++ ++ l++GW+ F k+n LkegD+++F+l+++++ l+v +fr Pd.00g415990.m01 167 HLGMNIPASFRKHFNTM--EN-QIVRLWVGDRSWPVKLIFQRNNDQ--LSAGWRAFLKENSLKEGDVCIFELIDTNNIALLVNIFR 247 44588999997444322..22.355455688*********999998..9************************9999999999997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MAAFPHQKVD HQGPKFRATT PHFLNMIADE TSGNKTLRVP KTFLDKCAEH LSDQIHLKLP 60 CGSEWEIKLR RCNGEAWFGK GWPEFSEFYS LKKGNSLLFR YEGNSKFNVL IFDESGTEMD 120 YPITITLIEE TDEEDDVKSV ESLEVNVEAA NEFVSSHPFF KVTLRKHLGM NIPASFRKHF 180 NTMENQIVRL WVGDRSWPVK LIFQRNNDQL SAGWRAFLKE NSLKEGDVCI FELIDTNNIA 240 LLVNIFRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 6e-22 | B3 family protein |