PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g415660.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 1030aa MW: 114582 Da PI: 8.3399

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g415660.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.5	3.4e-13	507	559	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g++ AeIrdp + r r+++g + t eeAa a+++a ++++g Pd.00g415660.m01 507 RYRGVRQRR-SGKFTAEIRDPA--KkvSRNRVWVGCYETSEEAALAYDRASLRIHG 559 7***999.7*****84..34335**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 1030 aa Download sequence
MHMAGSSGCA FGNSPVVCNR CGIQIVLRQV QEHAQNCPGV QPQVQQADGA LDTSASGTSA 60 TADQTQAATQ SGVAQSQAQV FQNFQIAAVQ QSQQLHLQSH PPYGTVPVAS QTQNQAQVNK 120 QQQLHPAVQT YPAARRQPLP QPQDFQVPSH SQPHPQHPMN TTVQPQTQHP SSHAVTGNHL 180 YPQPHLHQPV QSGAPQQRTM DMQSHGVPHS QSQNPVQIQS QSPQQLPVMR LPQSHIPNQQ 240 QPALLPSPGQ IRNINPAQQQ PVHSYAQQPG NTVQQRPLMR AVQRSIPRQY LRHQPYVQQQ 300 PPTQLHPRGQ SHSFPLHVHA YTQSQRNIAL SQGIQLSQSN LGGSRRPMMP IHGVQSQTSV 360 QTAGGLHMRP VHPTVYLPST NQSNMVRTKN LVQSGANWRP TTSERHAEQE SESSAEQIAK 420 NVTHDVGTAS AVVGDAEVKT VKSEMDMKSI DNENKPTGED KTNHGDTSSK EIPDIHALEN 480 GESVSQSMLN AADQNKVRKL GVARGRRYRG VRQRRSGKFT AEIRDPAKKV SRNRVWVGCY 540 ETSEEAALAY DRASLRIHGS KAVLNFPICH IRDCLERAST CPNHRQAQRT GERGCHSFNN 600 AEIQFCLCFR PSNNINEFSD IEAGNKNKKN SLSVFSLDQL RAATSGFSSH NVVSEHAEKA 660 PNVVYKGKLE DGRLIAVKRF TLSAWPDSRP FLEEARAVGR LSNQRLANLI GCCIEDDERL 720 LVAEFVPNET LSKHLFQWET QPMKWAMRLR VALYVAHALE YCSSKGQALY HDLNAHRVLF 780 DQDGNPRLSC FGLMKNSKDG KSFTNLAFTP AEFLRTGHFS NDDGNEMVRL ASQCLQYEPH 840 NRPDFKYIVS ALFPLQEQTE VPSYVLMGFP HGNIPPKQTV LSPLGEACLR LDLARIHEIL 900 LMIGYNEDEG AQTELSFQMW TDQMQERLNF KKQGDAAFRA KEFASAIEFY TEFIDRGSIE 960 SGTLFARRCL CYLMSDMAQE ALGDAMQALV QHPEWPTALY LQAAALKSLG LNNDAEQTLK 1020 DGSSLEVKKT

Sequence ? help Back to Top

Protein Sequence Length: 1030 aa Download sequence

MHMAGSSGCA FGNSPVVCNR CGIQIVLRQV QEHAQNCPGV QPQVQQADGA LDTSASGTSA  60
TADQTQAATQ SGVAQSQAQV FQNFQIAAVQ QSQQLHLQSH PPYGTVPVAS QTQNQAQVNK  120
QQQLHPAVQT YPAARRQPLP QPQDFQVPSH SQPHPQHPMN TTVQPQTQHP SSHAVTGNHL  180
YPQPHLHQPV QSGAPQQRTM DMQSHGVPHS QSQNPVQIQS QSPQQLPVMR LPQSHIPNQQ  240
QPALLPSPGQ IRNINPAQQQ PVHSYAQQPG NTVQQRPLMR AVQRSIPRQY LRHQPYVQQQ  300
PPTQLHPRGQ SHSFPLHVHA YTQSQRNIAL SQGIQLSQSN LGGSRRPMMP IHGVQSQTSV  360
QTAGGLHMRP VHPTVYLPST NQSNMVRTKN LVQSGANWRP TTSERHAEQE SESSAEQIAK  420
NVTHDVGTAS AVVGDAEVKT VKSEMDMKSI DNENKPTGED KTNHGDTSSK EIPDIHALEN  480
GESVSQSMLN AADQNKVRKL GVARGRRYRG VRQRRSGKFT AEIRDPAKKV SRNRVWVGCY  540
ETSEEAALAY DRASLRIHGS KAVLNFPICH IRDCLERAST CPNHRQAQRT GERGCHSFNN  600
AEIQFCLCFR PSNNINEFSD IEAGNKNKKN SLSVFSLDQL RAATSGFSSH NVVSEHAEKA  660
PNVVYKGKLE DGRLIAVKRF TLSAWPDSRP FLEEARAVGR LSNQRLANLI GCCIEDDERL  720
LVAEFVPNET LSKHLFQWET QPMKWAMRLR VALYVAHALE YCSSKGQALY HDLNAHRVLF  780
DQDGNPRLSC FGLMKNSKDG KSFTNLAFTP AEFLRTGHFS NDDGNEMVRL ASQCLQYEPH  840
NRPDFKYIVS ALFPLQEQTE VPSYVLMGFP HGNIPPKQTV LSPLGEACLR LDLARIHEIL  900
LMIGYNEDEG AQTELSFQMW TDQMQERLNF KKQGDAAFRA KEFASAIEFY TEFIDRGSIE  960
SGTLFARRCL CYLMSDMAQE ALGDAMQALV QHPEWPTALY LQAAALKSLG LNNDAEQTLK  1020
DGSSLEVKKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17500.1	6e-15	ERF family protein