PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g412750.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 237aa MW: 26247.4 Da PI: 9.9526 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.7 | 1.8e-15 | 19 | 61 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r++WT+eE+ l +++++G++ W+ Iar ++ gRt++ +k++w+ Pd.00g412750.m01 19 RNAWTEEEEWVLTYYHQLFGNK-WAEIARFLP-GRTDNAIKNHWN 61 789*******************.*********.***********9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 237 aa Download sequence |
MKLIITFRWY NHLCPAINRN AWTEEEEWVL TYYHQLFGNK WAEIARFLPG RTDNAIKNHW 60 NCTLKRKLDS YSPNGCDVDM HPHVWNEWKP VKVQKCRSSD RGANSLTNLI TSGSSKHSPL 120 SASSSVFVGA SASTRSSPLE SPSCYSTPQS RAQNVNVNLS SGSSPGSRLK NLALSFKNTP 180 SIIRKRSSRR PDASSAAVKS LGRCLEREFD AENNSGVTKC GQLFSAYATS SDVNVGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G32730.2 | 2e-28 | MYB family protein |