PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g412340.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 199aa    MW: 21572.2 Da    PI: 4.6197
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g412340.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.21.3e-151059155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++y+G+r ++  g+Wv+eIr+p++   ++r++lg++ t+e+Aa a++ a+++l+g
  Pd.00g412340.m01 10 TRYHGIR-CR-GGKWVSEIREPRK---TRRIWLGTYPTPEMAASAYDVAALALKG 59
                      589***9.55.7*********843...5***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MASSSCGKQT RYHGIRCRGG KWVSEIREPR KTRRIWLGTY PTPEMAASAY DVAALALKGG  60
DAVLNFPSSI ASYPSNEEAN NSLELKESPK KQEDDVTTMM NSTSLASSVG MDEEELFGMP  120
NLLAEMAEGM LLSPPRPPDY PESGNSDGGE SGLSIVVSLA INPREGEIDV VNRDLPDKEL  180
GRGISKKIVD VGFGYVHYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-34ERF family protein