PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g412320.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 105aa MW: 11172.7 Da PI: 10.0715 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.5 | 2.4e-16 | 10 | 58 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 s+y+G+r ++ g+Wv+eIr+p++ ++r++lg++ t+e+Aa+a++ a+++l+ Pd.00g412320.m01 10 SRYHGIR-CR-GGKWVSEIREPRK---TRRIWLGTYPTPEMAAAAYDVAALALK 58 78****9.55.7*********843...5**********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence |
MASSSCGKYS RYHGIRCRGG KWVSEIREPR KTRRIWLGTY PTPEMAAAAY DVAALALKRG 60 DAVLNFPSSI ASYPVPASTS PEDIRSAAAA AAALQRNAVV SAETA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 3e-27 | ERF family protein |