PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g412300.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 153aa    MW: 16894.1 Da    PI: 7.5052
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g412300.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.84.2e-161058154
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                      s+y+G+r  ++ g+Wv+eIr+p++   ++r++lg+f tae+Aa+a++ a+++l+
  Pd.00g412300.m01 10 SRYHGIR--SRGGKWVSEIREPRK---TRRIWLGTFPTAEMAAAAYDVAALALK 58
                      7899**5..679*********843...5**********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MASNPSRKQS RYHGIRSRGG KWVSEIREPR KTRRIWLGTF PTAEMAAAAY DVAALALKRG  60
DAVLNFPSSL DSYPVPASTL NLIEKKTKYE YDMMMMSSTS LASSVGMDEE ELFGMPNLLA  120
NMAEGMLVSP PRPSDYPDSS GNSDGADSRL WSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.13e-24ERF family protein