PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g412280.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 26010.3 Da PI: 4.8445 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 61 | 112 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +++Wv+e+r+p n+k++r++lg++ tae+Aa+a++ a+++++g Pd.00g412280.m01 61 PVYRGVRRRN-NNKWVCELREP--NNKKARIWLGTYPTAEMAARAHDVAALAFRG 112 68*****887.8******9998..4478************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 232 aa Download sequence |
MDMIYSQVSD LASLENPDTS SFSDASVTAR RASLSDEAVI LASSCPKRRA GRRVFKETRH 60 PVYRGVRRRN NNKWVCELRE PNNKKARIWL GTYPTAEMAA RAHDVAALAF RGKLACLNFA 120 DSAWRLPVPA STDAAEIRRA ATEAAEAFRQ AEDGDVDEKK SKGVVSEKKG CVEMEGSSNL 180 FYLDEEEIFE MPRLLDDMAE GLMLCPPQCL DGYMDWNDVE TADDLKLWSF SI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G51990.1 | 1e-62 | ERF family protein |