PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g412280.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 232aa    MW: 26010.3 Da    PI: 4.8445
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g412280.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-1861112155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++  +++Wv+e+r+p  n+k++r++lg++ tae+Aa+a++ a+++++g
  Pd.00g412280.m01  61 PVYRGVRRRN-NNKWVCELREP--NNKKARIWLGTYPTAEMAARAHDVAALAFRG 112
                       68*****887.8******9998..4478************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MDMIYSQVSD LASLENPDTS SFSDASVTAR RASLSDEAVI LASSCPKRRA GRRVFKETRH  60
PVYRGVRRRN NNKWVCELRE PNNKKARIWL GTYPTAEMAA RAHDVAALAF RGKLACLNFA  120
DSAWRLPVPA STDAAEIRRA ATEAAEAFRQ AEDGDVDEKK SKGVVSEKKG CVEMEGSSNL  180
FYLDEEEIFE MPRLLDDMAE GLMLCPPQCL DGYMDWNDVE TADDLKLWSF SI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.11e-62ERF family protein