PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g412240.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 286aa MW: 31614.7 Da PI: 5.4529 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.4 | 3.6e-18 | 114 | 165 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +++Wv+e+r+p + k+ r++lg++ tae+Aa+a++ a+++++g Pd.00g412240.m01 114 PVYRGVRRRN-NNKWVCELREP---NkKKSRIWLGTYPTAEMAARAHDVAALAFRG 165 68*****887.8******9998...5477************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 286 aa Download sequence |
MLPPGASTQS VSSCQCGAPP ATPSPIYKSP SPLLSDLALH TPLRNTTQST QITLLMDMFY 60 AQLSNSPDQP ESSSFSDASV TTLPASSSDE NVILASSRPK KRAGRRVFKE TRHPVYRGVR 120 RRNNNKWVCE LREPNKKKSR IWLGTYPTAE MAARAHDVAA LAFRGKLACI NFADSAWRLP 180 LPASMDTMDI RRAAAEAAEG FRPAEFGGLS SDSSDEKEKI FSVDMEKSSS SLCLFYLDEE 240 EMFDMPRLID NMAQGLLLAP PQCSDGYLNW DDMETEADAK LWSFSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G25490.1 | 5e-62 | ERF family protein |