PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g412230.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 23216.3 Da PI: 4.4295 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 39.5 | 1.4e-12 | 38 | 79 | 12 | 55 |
AP2 12 rgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +++Wv+e+r+p + k+ ++lg++ tae+Aa+a++ a+++++g Pd.00g412230.m01 38 NNKWVCELRHP---NkKKSGIWLGTYPTAEMAARAHDVAALAFKG 79 68********9...5467***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MDIIFSQLSD SADQPKSSSS SDASVATLRT SDVILADNNK WVCELRHPNK KKSGIWLGTY 60 PTAEMAARAH DVAALAFKGN LACLNFADSG WRLPVAASMD SMDIQRAAAE AAEGFRPVEF 120 GGVSSDSSDE KERMVVVEEK KKKQAIVYMG KSCSRLNLFY LDEEEMFDMP RLIDNMAEGL 180 LLSPPQCLAG YLNWDDMETE ADPKLWSFSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 2e-40 | ERF family protein |