PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g409000.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 517aa MW: 56235.3 Da PI: 4.3847 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 115.9 | 2.6e-36 | 41 | 132 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+++++++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll Pd.00g409000.m01 41 FLSKTYDMVDDPATDQVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLL 124 9********************999*****************************************999.........**************** PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k Pd.00g409000.m01 125 KSINRRKP 132 *****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 517 aa Download sequence |
MGGANNNGDD ASMAGGGGGA QQVGLAPAPA PLLNSNAPPP FLSKTYDMVD DPATDQVVSW 60 SPTNNSFVVW NPPEFARDLL PKYFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGQ 120 KHLLKSINRR KPAHGHSHQQ PQPSQGQNSV AACVEVGKFG LEEEVERLKR DKNVLMQELI 180 KLRQQQQSTD NQLQAMVQRL QGMEQRQQQM MSFLAKAVQS PSFLTQFVQQ QNESNRRIIE 240 VNKKRRLKQD EGGDSGTPDG QIVKYQPPVN EAAKAMLRQI MTTDTSSSRL ESFNDTHDNN 300 LTGNVSSSSS SLIDSGSSSS RASGVTLQEV PLTSGLGSSS AISEVQSSLQ AANSGTVTRA 360 PFSDLNALVG AQEAQSIPIS QAGVIIPELS QIPEMVPECL VDIPEENMAP DAGVGFIENM 420 ASDAGDGFIS DILGLDGSMT IDIDSIPPDP DIEALLKNWD QFLQSPEPDE MDSTSAEGVP 480 MGNEEQPSTE NGWDKTQHNM DNLTEKMGRL TSDTEGV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 242 | 249 | NKKRRLKQ |
2 | 243 | 248 | KKRRLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32330.1 | 1e-132 | HSF family protein |