PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g407600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 297aa    MW: 33655.8 Da    PI: 10.1169
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g407600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.26.1e-1163113146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 
                       +++WT+eE+  l+ +v ++G g W+tI            R+  ++k++w++
  Pd.00g407600.m01  63 KQKWTAEEEAALKAGVLKHGAGKWRTILTDPEfnsilHLRSNVDLKDKWRN 113
                       79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MNWQSALEFE FHSFSVIFSD PDLPICIANS FHGFDVNLLR VQNLTGQISF WKIFGFWLMG  60
APKQKWTAEE EAALKAGVLK HGAGKWRTIL TDPEFNSILH LRSNVDLKDK WRNINVTAIW  120
GSRQKAKLAL KRNLPNPKHD NNPLAVSTVI QSHEEIVDAK PLAISGGKLQ TTESKQPIAR  180
LDHLILKAIT NLKELGGSDR ASIAMYIEAQ RRTIPRRRGS KVYTLNLQMP KEKMENKKVV  240
VEQENLDVND WDIYREVIAP SHGRVLGLGC GVKAKDAYYS STVISVDAWN WKKIMSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67580.12e-55MYB_related family protein