PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g406930.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 512aa MW: 56638.5 Da PI: 7.1162

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g406930.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.8e-09	307	341	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ Pd.00g406930.m02 307 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 341 569*****************************885 PP
2	ELK	40.5	5.6e-14	261	282	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ Pd.00g406930.m02 261 ELKGQLLRKYSGYLGSLKQEFM 282 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MEGGSNGTCS MMAFGENSSN GGGLCPMMMV PALMTSHHSH HHHHQHHHPT NPTNADPNTT 60 TPFQLPQLPP SNHNRNSSTS SFIFNDHHPN NNNHPAAAAA CYFMDNNSNH DGSSSSSSSV 120 KAKIMAHPHY HRLLASYINC QKVGAPPEVV ARLEEACSSA ASIGQMMSSS SGSGCLGEDP 180 ALDQFMEAYC EMLTKYEQEL SKPFKEAMIF LQRIESQFKA LTLSSSSDSA VCGDGLDRNG 240 SSEEEVDVNN NFIDPQAEDR ELKGQLLRKY SGYLGSLKQE FMKKRKKGKL PKEARQQLLD 300 WWSRHYKWPY PSESQKLALA ESTGLDQKQI NNWFINQRKR HWKPSEDMQF TSITSIRIRG 360 NVEKADLWMY ITNQLNIIRP SLGSAFEYGF VGDVLFCEEL SPISKAGSSF LANRRLLTSI 420 STPESSGGAF SSNLLSAKPV VPSEGTTGLC QDLLAKRQQG THSTKTTIEV SGTGRKPWNQ 480 VLVERGRDHC VVPSSEEVPQ CMVLSHEAML LS

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MEGGSNGTCS MMAFGENSSN GGGLCPMMMV PALMTSHHSH HHHHQHHHPT NPTNADPNTT  60
TPFQLPQLPP SNHNRNSSTS SFIFNDHHPN NNNHPAAAAA CYFMDNNSNH DGSSSSSSSV  120
KAKIMAHPHY HRLLASYINC QKVGAPPEVV ARLEEACSSA ASIGQMMSSS SGSGCLGEDP  180
ALDQFMEAYC EMLTKYEQEL SKPFKEAMIF LQRIESQFKA LTLSSSSDSA VCGDGLDRNG  240
SSEEEVDVNN NFIDPQAEDR ELKGQLLRKY SGYLGSLKQE FMKKRKKGKL PKEARQQLLD  300
WWSRHYKWPY PSESQKLALA ESTGLDQKQI NNWFINQRKR HWKPSEDMQF TSITSIRIRG  360
NVEKADLWMY ITNQLNIIRP SLGSAFEYGF VGDVLFCEEL SPISKAGSSF LANRRLLTSI  420
STPESSGGAF SSNLLSAKPV VPSEGTTGLC QDLLAKRQQG THSTKTTIEV SGTGRKPWNQ  480
VLVERGRDHC VVPSSEEVPQ CMVLSHEAML LS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	286	LKQEFMKKRK
2	283	287	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-121	TALE family protein