PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g406930.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 531aa MW: 58752 Da PI: 7.6276

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g406930.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.8e-09	307	341	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ Pd.00g406930.m01 307 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 341 569*****************************885 PP
2	ELK	40.5	5.8e-14	261	282	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ Pd.00g406930.m01 261 ELKGQLLRKYSGYLGSLKQEFM 282 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MEGGSNGTCS MMAFGENSSN GGGLCPMMMV PALMTSHHSH HHHHQHHHPT NPTNADPNTT 60 TPFQLPQLPP SNHNRNSSTS SFIFNDHHPN NNNHPAAAAA CYFMDNNSNH DGSSSSSSSV 120 KAKIMAHPHY HRLLASYINC QKVGAPPEVV ARLEEACSSA ASIGQMMSSS SGSGCLGEDP 180 ALDQFMEAYC EMLTKYEQEL SKPFKEAMIF LQRIESQFKA LTLSSSSDSA VCGDGLDRNG 240 SSEEEVDVNN NFIDPQAEDR ELKGQLLRKY SGYLGSLKQE FMKKRKKGKL PKEARQQLLD 300 WWSRHYKWPY PSESQKLALA ESTGLDQKQI NNWFINQRKR HWKPSEDMQF VVMDATHPGH 360 YYMDTLTLSL CPPPKLKEGS LSGWRKRIGG CKSSNAFRRP DLHRLLPYGY GDVLFCEELS 420 PISKAGSSFL ANRRLLTSIS TPESSGGAFS SNLLSAKPVV PSEGTTGLCQ DLLAKRQQGT 480 HSTKTTIEVS GTGRKPWNQV LVERGRDHCV VPSSEEVPQC MVLSHEAMLL S

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MEGGSNGTCS MMAFGENSSN GGGLCPMMMV PALMTSHHSH HHHHQHHHPT NPTNADPNTT  60
TPFQLPQLPP SNHNRNSSTS SFIFNDHHPN NNNHPAAAAA CYFMDNNSNH DGSSSSSSSV  120
KAKIMAHPHY HRLLASYINC QKVGAPPEVV ARLEEACSSA ASIGQMMSSS SGSGCLGEDP  180
ALDQFMEAYC EMLTKYEQEL SKPFKEAMIF LQRIESQFKA LTLSSSSDSA VCGDGLDRNG  240
SSEEEVDVNN NFIDPQAEDR ELKGQLLRKY SGYLGSLKQE FMKKRKKGKL PKEARQQLLD  300
WWSRHYKWPY PSESQKLALA ESTGLDQKQI NNWFINQRKR HWKPSEDMQF VVMDATHPGH  360
YYMDTLTLSL CPPPKLKEGS LSGWRKRIGG CKSSNAFRRP DLHRLLPYGY GDVLFCEELS  420
PISKAGSSFL ANRRLLTSIS TPESSGGAFS SNLLSAKPVV PSEGTTGLCQ DLLAKRQQGT  480
HSTKTTIEVS GTGRKPWNQV LVERGRDHCV VPSSEEVPQC MVLSHEAMLL S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	286	LKQEFMKKRK
2	283	287	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-131	TALE family protein