PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g406420.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 270aa    MW: 28769.3 Da    PI: 5.5975
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g406420.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding271e-083272348
                      -HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                      +W++Ia +++ gRt++++k++w+++l
  Pd.00g406420.m01  3 RWSLIAGRIP-GRTDNEIKNYWNTHL 27
                      4*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MYRWSLIAGR IPGRTDNEIK NYWNTHLSKK LISQGIDPRT HKPLNPDIHS SATVAAADMD  60
NNINKAATVS SSKTNRFSSN TNPSPPPTSE PSEPLAHHQG AAPNTNGNNG NIVTNIANKE  120
NGYLVDDQEL GTMVHGYANM TTSDHASAAA MGTLSLRSNG SNHGGALLGG NEEDDDMNCC  180
ADDVFSSFLN SLINEDPFAG QHHLQQQVLL QNGNNAHNAA AVDGSDHHVP LISSGAGATA  240
PSTFGWESAV LMSSAFIQND HHRVLNDQTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.12e-22MYB family protein