PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g405790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 276aa    MW: 30425 Da    PI: 8.6227
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g405790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.17.7e-1484130354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++h+++E+rRRdriN  +++Lr+l+Pk+      K++Ka+ L  +++++k+L
  Pd.00g405790.m01  84 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSVIDHVKDL 130
                       79*************************8.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MESKVLEKCW LLLAMENCYC AGPQGATWAP YNSAALSNES SRFPLPWPPH ASSSTQFQFC  60
GFPNSWSAAA EGADEEDRAA TASKSHSQAE KRRRDRINAQ LATLRKLIPK SDKMDKAALL  120
GSVIDHVKDL KRKAMEVSKA FMVPTEMDEI TIDSDPAQAA ANSSSNNINM NKSRCSIVIR  180
ASVCCDDRPE LFSELIQVLK GLKLTAVRAD MASVGGRIKS VLVLCKDGEE DEALCISTLK  240
QSLKLVLSKI CASSMAPNCR IRSKRQRFFL PFQYPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.11e-44bHLH family protein