PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g405430.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 24748 Da PI: 5.9293 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.2 | 3e-11 | 59 | 91 | 2 | 38 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38 +y+GVr+++ +g+WvAeIr+p++ r+r +lg+f t Pd.00g405430.m01 59 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFST 91 59****999.**********954...5********88 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MEDEHPLSPP AAPPHHPPQD NDNNNKFPDS TTASTATTPT ETNNKKCKGK GGPDNNKFRY 60 RGVRQRSWGK WVAEIREPRK RTRKWLGTFS TPRTPPAPTT GPPSSSTVPG PSSTSSPPYP 120 VSDGGGGDTS TSYQNPNPSH DQYQELLHHN QNNQADSCSF DDGNSIMGSR LSLSSSQPMP 180 VAPGCSDPMS GVGPMSPLMW PLTSEEECAP SLWDYGDPFF LDFKGFDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40220.1 | 5e-24 | ERF family protein |