PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g403600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 356aa    MW: 38419.4 Da    PI: 8.5839
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g403600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof119.61.2e-3772132262
            zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                       +e+alkcprC+s ntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+
  Pd.00g403600.m01  72 PETALKCPRCESINTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSK 132
                       67899*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MVFSSVPVYM DPPNWQQQQT NHQQQGGGND QNNHQLPPPP PQEAGCNSEG GGSGSSSIRP  60
GSMSGRAQLA KPETALKCPR CESINTKFCY FNNYSLSQPR HFCKTCRRYW TRGGALRSVP  120
VGGGCRRNKR SKGSGGSSRS KSPAAAGNSS SSTVNSSNSC STSDNIIGHL AHPPPHQLPF  180
LPSLHHLGDY GSGDMIGLNN FGGMNQPADV EFQQHQFGSD RLTVRPNLGI NMINTEHWRS  240
SLLQHQVQQF PNFLANLEPP TSSHGMYQFE GGNVHQNVGL LPMSKPLDSV SPGVAATQMA  300
NVKMEDNNHQ ALNLSRNFLG SLGNDHHQYW GNNGGGGNAW TDLSGFTTSS STSHLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.28e-40Dof family protein