PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g401830.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 289aa    MW: 31655.7 Da    PI: 8.805
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g401830.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.3e-20148198256
               AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g+
  Pd.00g401830.m01 148 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRGA 198
                       59*******.**********32....25**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MATVPFCHNP LTFHSPETFR FLSEANSLYE SFFSKTHFSV SSVSFPNQLN IFNPPCHTNV  60
SAEIPICGVS GIESESQTET PPVLDGIAAV VGQHVLYGSQ RTCNVPTNGE TTQISEFGYC  120
SEPVGSAETS QKDADNKKGI GNLSVQKNYR GVRKRPWGRW SAEIRDRIGR CRHWLGTFDT  180
AEEAARAYDA AARRLRGAKA RTNFEIPSVF PLSSPCSSSS SSDAKRVIRG KNNIKGLKSK  240
RKCSVVTCVA HLFSEAPTHL RSQVMEIKEN VELDLKLGVG VTDIGKTSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.19e-20ERF family protein