PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g400750.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 228aa    MW: 25561.5 Da    PI: 5.7447
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g400750.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding223.7e-0718392446
                      HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqk 46
                      W++I ++++ +Rt++++k++w++
  Pd.00g400750.m01 18 WSAITAHLP-KRTDNEVKNYWHS 39
                      *********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MFRHEVEYGF LSIGLLGWSA ITAHLPKRTD NEVKNYWHSC LKKRLALKGY DPVTHKPKNT  60
IFGFANGSTD DPKTGSNLNH MAQWESVRLQ AEARYVRDSE LHKQAYHPYN NNDISTASSI  120
LSSYNEDFGQ DVPQCLDICS FDNRLAGDFE PPTISAISNN GSSLMDCFVH EPVGQSFDEN  180
YGTSITEPFA TVHHNMGFKN NGACLEDFGL WEIIMQGKKD CPISGISM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.12e-29MYB family protein