PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g398350.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 196aa MW: 21296.4 Da PI: 8.3102 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.5 | 7.7e-19 | 65 | 115 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr p + r r +lg+f ta eAa a+++a+++++g Pd.00g398350.m01 65 CNYRGVRQRT-WGKWVAEIRAP---N-RgSRLWLGTFPTAIEAALAYDEAARAMYG 115 56*****999.**********8...3.35************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MTKLVKTDPR QDGSNPVAET LAKWKAYNDH LDSCNDESKP IRRVPAKGSK KGCMKGKGGP 60 ENSRCNYRGV RQRTWGKWVA EIRAPNRGSR LWLGTFPTAI EAALAYDEAA RAMYGSAARL 120 NFPNISISSL SKDPSSRATL SAPSLLATSA GSESSGRSDH SEDCAAQGKV NYLSPNVENE 180 DTTTNRDQTN EDGEDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 7e-34 | ERF family protein |