PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g397830.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 167aa    MW: 18151.9 Da    PI: 6.1095
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g397830.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.35.8e-161867255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      ++kGVr++k +g+Wv+eIr+p   g +  r +lg+f ++e Aa a++ a  +l+ 
  Pd.00g397830.m01 18 KFKGVRQRK-WGKWVSEIRVP---G-TqDRLWLGSFSSPEAAAVARDIAYYCLRR 67
                      89******9.**********8...3.35************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MSYSSEESSS SPGTGQRKFK GVRQRKWGKW VSEIRVPGTQ DRLWLGSFSS PEAAAVARDI  60
AYYCLRRPST LEGLNFPLVL PSSVHADMSP RSIQKAASDA GMAVDAQLVA NRSPQAGGRQ  120
SNNGSHHGVE SEVWEDMGES SRTNWGGHMG SGNGYEDLSI SIEDYDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.12e-45ERF family protein