PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g397830.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 167aa MW: 18151.9 Da PI: 6.1095 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.3 | 5.8e-16 | 18 | 67 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++kGVr++k +g+Wv+eIr+p g + r +lg+f ++e Aa a++ a +l+ Pd.00g397830.m01 18 KFKGVRQRK-WGKWVSEIRVP---G-TqDRLWLGSFSSPEAAAVARDIAYYCLRR 67 89******9.**********8...3.35************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MSYSSEESSS SPGTGQRKFK GVRQRKWGKW VSEIRVPGTQ DRLWLGSFSS PEAAAVARDI 60 AYYCLRRPST LEGLNFPLVL PSSVHADMSP RSIQKAASDA GMAVDAQLVA NRSPQAGGRQ 120 SNNGSHHGVE SEVWEDMGES SRTNWGGHMG SGNGYEDLSI SIEDYDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22810.1 | 2e-45 | ERF family protein |