PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g397210.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 379aa MW: 41847.6 Da PI: 5.5747 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.9 | 1.6e-20 | 148 | 197 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g Pd.00g397210.m01 148 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 197 7********.**********7.....337*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 379 aa Download sequence |
MCLLKVANQR SSGGQYDRFE SSNDDDHGEE AYTYEEQPQA AAGNIDHELM NQLPHQNVSP 60 TMFLGYSRPT EMSAMAQFME SAQRVYRGSY GDFRATTQAE SSSGATVTEE ATNAVTTTTT 120 ATAASAVPST PSSSETVSFE EPGERRRRYR GVRQRPWGKW AAEIRDPHKA ARVWLGTFDT 180 AEAAARAYDE AALRFRGNRA KLNFPENVRL VHPQPQPPNL QNFNSDSVPT HLAPILSAQP 240 LQPPPQPPQQ LYQPQPFHGS SDFLRDYFDY SQLLQSSTDF HAQQQQQQQQ PTNLLQQMYY 300 NSQLASLQSS LLNPPSSSSS SSTLPSSASP SASFPLFFSD QNQQLGFFHP PRNQINPGGS 360 SDFPAPSWSQ SGNNPSSSG |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 144 | 149 | ERRRRY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G64750.1 | 6e-16 | ERF family protein |