PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g397210.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 379aa    MW: 41847.6 Da    PI: 5.5747
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g397210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-20148197255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  Pd.00g397210.m01 148 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 197
                       7********.**********7.....337*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MCLLKVANQR SSGGQYDRFE SSNDDDHGEE AYTYEEQPQA AAGNIDHELM NQLPHQNVSP  60
TMFLGYSRPT EMSAMAQFME SAQRVYRGSY GDFRATTQAE SSSGATVTEE ATNAVTTTTT  120
ATAASAVPST PSSSETVSFE EPGERRRRYR GVRQRPWGKW AAEIRDPHKA ARVWLGTFDT  180
AEAAARAYDE AALRFRGNRA KLNFPENVRL VHPQPQPPNL QNFNSDSVPT HLAPILSAQP  240
LQPPPQPPQQ LYQPQPFHGS SDFLRDYFDY SQLLQSSTDF HAQQQQQQQQ PTNLLQQMYY  300
NSQLASLQSS LLNPPSSSSS SSTLPSSASP SASFPLFFSD QNQQLGFFHP PRNQINPGGS  360
SDFPAPSWSQ SGNNPSSSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144149ERRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.16e-16ERF family protein