PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g396130.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 287aa    MW: 31525.5 Da    PI: 9.3045
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g396130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.3e-20153203256
               AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g+
  Pd.00g396130.m01 153 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRGA 203
                       59*******.**********32....25**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MNSKTMATVP FCHNPLTFHA PETFRFLSEA NSLYESFFSK THFSVSSVSF PNQLNIFNPP  60
CHTNVSAEIP ICGVSGKESE SQTETPPVLD GIAAVVGQHV LYGSQRTCNV PTNGETTQIS  120
EFGYCSEPVG SAETSKKDAY NKKGIGNLSV QKNYRGVRKR PWGRWSAEIR DRIGRCRHWL  180
GTFDTAEEAA RAYDAAARRL RGAKARTNFE IPSVFPLSSP CSSSSSSDAK RVIRGKNNIK  240
GLKSKRKCSV VTCVAHLFSE APTHLRSQVM EVKENAELDL KLGVGSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.19e-20ERF family protein