PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g394210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 388aa MW: 42512.1 Da PI: 6.226

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g394210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.5	6.7e-36	77	193	2	102
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssaseceae 76 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak +i++l+++ s +++ Pd.00g394210.m01 77 TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAELppwhpitgvaannaepdqS-------NPN 162 79**************************************************************7777776665544443210.......111 PP TCP 77 sssssasnsssg................kaaksaakskksqk 102 + ++ + + ++++++ Pd.00g394210.m01 163 E----------MviaggaeetessgynfHQLQRQ-MGENNNN 193 1..........12222222222222222111111.1111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MRERELRLGV GLELDIDLLS FGWDLLPDQT LPPLTDVFTA LIVIGQGFIG VRNLEIAMAE 60 FLGLAAAATG GHIVRSTGRK DRHSKVYTAK GPRDRRVRLS AHTAIQFYDV QDRLGYDRPS 120 KAVDWLIKKA KSSIDKLAEL PPWHPITGVA ANNAEPDQSN PNEMVIAGGA EETESSGYNF 180 HQLQRQMGEN NNNQANNVSS FNIPPSLDSD TIADTMKSFF PTSSAATSSI NFQSYPADHD 240 LISRTTNLNP CQDLGLSLHS FQDQGLNIHH THSQQSQGDT NHNNDQIQTL FAAGAGGSTV 300 GFDTSYQRMV AWSNQNRGGD GGFVFNSHSQ ALPQQAYAHA QGGTLQSSFS PSIDHHPLPL 360 PIPPTIDWIT NSIFGVSNWE TRRKIQSN

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MRERELRLGV GLELDIDLLS FGWDLLPDQT LPPLTDVFTA LIVIGQGFIG VRNLEIAMAE  60
FLGLAAAATG GHIVRSTGRK DRHSKVYTAK GPRDRRVRLS AHTAIQFYDV QDRLGYDRPS  120
KAVDWLIKKA KSSIDKLAEL PPWHPITGVA ANNAEPDQSN PNEMVIAGGA EETESSGYNF  180
HQLQRQMGEN NNNQANNVSS FNIPPSLDSD TIADTMKSFF PTSSAATSSI NFQSYPADHD  240
LISRTTNLNP CQDLGLSLHS FQDQGLNIHH THSQQSQGDT NHNNDQIQTL FAAGAGGSTV  300
GFDTSYQRMV AWSNQNRGGD GGFVFNSHSQ ALPQQAYAHA QGGTLQSSFS PSIDHHPLPL  360
PIPPTIDWIT NSIFGVSNWE TRRKIQSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	9e-52	TCP family protein