PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g394130.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 322aa    MW: 34797.8 Da    PI: 9.1224
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g394130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97.1e-20192241255
               AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrd +     + +r++lg+f tae Aa+a+++a+++++g
  Pd.00g394130.m01 192 RYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFETAEAAAQAYDEAALRFRG 241
                       7********.**********66.....56*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MCVLKVAEKD RRAARHSNIG TEHSIEEWLY EPLVFSQQLQ QRQRQRGGGS GGGGGGSEIL  60
ASAGSSMLLR LDREREMSAM VSALAHVVAG DEELAAAESS LVINRQSEVV GGGLISSSVG  120
GSDSGTKRGR EEEEGGGGQS VTRLCRAFGE FPQQSSSPVG EGSSTTPPTQ TAFPPTTFVY  180
SATQIAEPIR RRYRGVRQRP WGKWAAEIRD PFKAARVWLG TFETAEAAAQ AYDEAALRFR  240
GNKAKLNFPE NVRLRTPIAD SLTIQLNNSA PPNTLLSVAT STEPIVHSQA LQSMQHSSHE  300
ASRNLLSYSH GGLEVNPRRR TL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.14e-27ERF family protein