PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g394130.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 322aa MW: 34797.8 Da PI: 9.1224 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.9 | 7.1e-20 | 192 | 241 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrd + + +r++lg+f tae Aa+a+++a+++++g Pd.00g394130.m01 192 RYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFETAEAAAQAYDEAALRFRG 241 7********.**********66.....56*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MCVLKVAEKD RRAARHSNIG TEHSIEEWLY EPLVFSQQLQ QRQRQRGGGS GGGGGGSEIL 60 ASAGSSMLLR LDREREMSAM VSALAHVVAG DEELAAAESS LVINRQSEVV GGGLISSSVG 120 GSDSGTKRGR EEEEGGGGQS VTRLCRAFGE FPQQSSSPVG EGSSTTPPTQ TAFPPTTFVY 180 SATQIAEPIR RRYRGVRQRP WGKWAAEIRD PFKAARVWLG TFETAEAAAQ AYDEAALRFR 240 GNKAKLNFPE NVRLRTPIAD SLTIQLNNSA PPNTLLSVAT STEPIVHSQA LQSMQHSSHE 300 ASRNLLSYSH GGLEVNPRRR TL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50080.1 | 4e-27 | ERF family protein |