PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g391360.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 351aa MW: 39167.6 Da PI: 5.6487 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.4 | 1.9e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv++++++G g+W++ ++ g++R++k+c++rw +yl Pd.00g391360.m01 14 KGPWTPEEDQKLVQYIEEHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52 | 1.6e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++ +++++ lG++ W++Ia ++ gRt++++k++w+++l Pd.00g391360.m01 67 RGKFTEDEEQTILHLHSILGNK-WSAIATHLD-GRTDNEIKNFWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MGRSPCCDES GLKKGPWTPE EDQKLVQYIE EHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF TEDEEQTILH LHSILGNKWS AIATHLDGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHQPRT DLFSGLSQLL ALANLQDLMQ QYQPLDIDQH AATLQADQAA QLAKLQYMQH 180 LLQSVAYISS GENYSQNRNT ADTDMEAFNL LNSLVPSIKE NPILSSSQLE NPSSFAPGYG 240 GTSQPLHHQS LLPHDPQVPF SSLPSLNSNH EMGSNYTMVS QEDNPPHDHD DSPWFDNLLS 300 PAPNSIPPTM TGMSISNPGG DVCCSTSSYG GRSSGSSFYW PELFLEDANY A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 1e-104 | MYB family protein |