PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g390510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 498aa    MW: 55869 Da    PI: 4.0748
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g390510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.99.4e-08232280247
                       SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +rW++eE++l+ ++v    + lG++ W+  +  ++  Rt k+++s+++++
  Pd.00g390510.m01 232 QRWSEEEEQLFHQVVflnsASLGKNFWDNLSTVFP-SRTKKEIVSYYFNV 280
                       79*************4444457777**********.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    
MVQKRPLDDE QIFVSFKHPR QVGHSKELVS FSESVFPEDV SKKPQTLGGE DVETSAPGSF  60
TISSWTTSST SEEDSLLEAP FHGSFPDCFN PERPIRTLAQ SEDIYSFLLD HPPRKSVSIG  120
PEHQADVPLW DAQGTNNNSN NLDTSEAVSN SDLEDEKRLM GTCVIPMPDS DLSADTGCIV  180
GIGRTDCSCE DEDSVRCVRQ HISEAREKLI KTIGPKRFEE LGFSDMGEQV AQRWSEEEEQ  240
LFHQVVFLNS ASLGKNFWDN LSTVFPSRTK KEIVSYYFNV FMLVKRAGQN RYDPINVDSD  300
NDEWQGSNDY GDNQLAVTED EDSVVESPIC QNVPGYYQSW KDNLQEYDEE VVDDTCDDNV  360
NVDVFGGGTK QILDRCYGLV DNCSTCPIAQ LQDKISWDEK GDQEVQDDSC TSFDAAAASQ  420
ENQLKSEEGN HWSGGFNGSS NRGDHEYVLE PCDTKIWDAG YMTCPENKVD FLPTCNMIEE  480
VFGKESWNYK ARDGKNLG