PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g387660.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 1029aa MW: 114498 Da PI: 6.9918

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g387660.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.7	9.1e-40	142	219	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska+++ v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ Pd.00g387660.m01 142 VCQVEDCKADLSHAKDYHRRHKVCDMHSKATKARVGNVLQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 219 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1029 aa Download sequence
MFLRLFRSEV GNFACDGIEG CEYGDVVEDV EGLSGARNFY GPMVSDLKAV GKKSLEWDLN 60 DCKWDGDLFT ASPLNSIPSD FRSRQLFPVQ PETPSNAENE ELNNEAGSLN LKLGEQAYPI 120 MEGEVQTGKK TKIVGTTLNR AVCQVEDCKA DLSHAKDYHR RHKVCDMHSK ATKARVGNVL 180 QRFCQQCSRF HVLQEFDEGK RSCRRRLAGH NRRRRKTHPD PVVNGGSLND ERGSSYLLIS 240 LLRILSNMQS NSSDQTKDQD LLSHLLRSLA NLAGTVDGRS ISALLPGSQG LLNSGPSVQT 300 AQKVPDMVSN GCEPSRPSVS ASKRDDCVNL EDPLRPIRQC PTVPASDLLQ KRISSVDADH 360 RSLQVVSGIQ AAKPLPSRDS VPSKSVAPDA TMGRMQLNGI DLNNTYDDSQ DYLGNLGSSH 420 SPVNPGTVSL GFPLWMQQES QKSSPPQTSG TSDSTSTQSP STSSGEGQSR TDRIVFKLFG 480 KDPNDLPFVL RSQILDWLSH SPSDIESYIR PGCIILTIYL RLEKSTWEEL CCHLGSNLKR 540 LLHAANDPFW TTGWVYTRVQ QNVAFTYNGQ VVLDTPLPLK SHKNCRISYI KPIAVSLSER 600 AQFVVKGFNL SRSTTRLLCA LEGKYLAQET CYDLMDSADT TVEHDEQHCL RFSCSIPNVT 660 GRGFIEVEDH GLSSSFFPFI VAEQEVCSEI CMLEGVIEVA ETADDIQREP KKLEAKNLAM 720 DFIHELGWLL HRSHTKFRLG HMDPNLDLFP FRRFRLLMEF SMDHDWCAVV KKLLGILFEG 780 NVDAGEHPSI ELGLLDMSLL HRAVRRKCRS MVELLLRFVP DKGLDKTGSE QKQQVDRDVN 840 NFLFKPDAVG PMGLTPLHVA ASTDGCEIIL DALTDDPGKV GIEAWKYARD STGLTPNDYA 900 CLRGRYSYLH IVQRKISKKL ESGQVVLDIP GTILDSNSKQ KQSDGHKSSK VASLETEKIE 960 IKAMQGHCKL CEMKLAYGNT RSLVYRPAML SMVAIAAVCV CVALLFKSSP EVVYVFQPFR 1020 WELLKYGPS

Sequence ? help Back to Top

Protein Sequence Length: 1029 aa Download sequence

MFLRLFRSEV GNFACDGIEG CEYGDVVEDV EGLSGARNFY GPMVSDLKAV GKKSLEWDLN  60
DCKWDGDLFT ASPLNSIPSD FRSRQLFPVQ PETPSNAENE ELNNEAGSLN LKLGEQAYPI  120
MEGEVQTGKK TKIVGTTLNR AVCQVEDCKA DLSHAKDYHR RHKVCDMHSK ATKARVGNVL  180
QRFCQQCSRF HVLQEFDEGK RSCRRRLAGH NRRRRKTHPD PVVNGGSLND ERGSSYLLIS  240
LLRILSNMQS NSSDQTKDQD LLSHLLRSLA NLAGTVDGRS ISALLPGSQG LLNSGPSVQT  300
AQKVPDMVSN GCEPSRPSVS ASKRDDCVNL EDPLRPIRQC PTVPASDLLQ KRISSVDADH  360
RSLQVVSGIQ AAKPLPSRDS VPSKSVAPDA TMGRMQLNGI DLNNTYDDSQ DYLGNLGSSH  420
SPVNPGTVSL GFPLWMQQES QKSSPPQTSG TSDSTSTQSP STSSGEGQSR TDRIVFKLFG  480
KDPNDLPFVL RSQILDWLSH SPSDIESYIR PGCIILTIYL RLEKSTWEEL CCHLGSNLKR  540
LLHAANDPFW TTGWVYTRVQ QNVAFTYNGQ VVLDTPLPLK SHKNCRISYI KPIAVSLSER  600
AQFVVKGFNL SRSTTRLLCA LEGKYLAQET CYDLMDSADT TVEHDEQHCL RFSCSIPNVT  660
GRGFIEVEDH GLSSSFFPFI VAEQEVCSEI CMLEGVIEVA ETADDIQREP KKLEAKNLAM  720
DFIHELGWLL HRSHTKFRLG HMDPNLDLFP FRRFRLLMEF SMDHDWCAVV KKLLGILFEG  780
NVDAGEHPSI ELGLLDMSLL HRAVRRKCRS MVELLLRFVP DKGLDKTGSE QKQQVDRDVN  840
NFLFKPDAVG PMGLTPLHVA ASTDGCEIIL DALTDDPGKV GIEAWKYARD STGLTPNDYA  900
CLRGRYSYLH IVQRKISKKL ESGQVVLDIP GTILDSNSKQ KQSDGHKSSK VASLETEKIE  960
IKAMQGHCKL CEMKLAYGNT RSLVYRPAML SMVAIAAVCV CVALLFKSSP EVVYVFQPFR  1020
WELLKYGPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein