PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g387650.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 966aa MW: 107362 Da PI: 6.7023

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g387650.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.9	4.3e-41	106	183	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC++hska+++lv + +qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ Pd.00g387650.m01 106 VCQVEDCKADLSNAKDYHRRHKVCDMHSKASTALVGNAMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHP 183 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 966 aa Download sequence
MEAEFGGKAH SYYGMKAVGK KSFEWDLNDW KWDGDLFTAS PLNSVPSACR SKQLFPVRPE 60 TPSNAVHDEA GSLNLNLGGQ AYPIMEGEVQ TGKKTKIVGT TSNRAVCQVE DCKADLSNAK 120 DYHRRHKVCD MHSKASTALV GNAMQRFCQQ CSRFHVLQEF DEGKRSCRRR LAGHNRRRRK 180 THPDTTANGG SLNDERGSSY LLISLLRILS NMHSTSSDQT KDQDLLSHLL RSLANLAGTA 240 DGRNISTLLQ GSQGLFNSGT SVQITKVPDM DDGVNLEDLR PVGQCSVVPA SDMLERRISS 300 VDDPGSLQVL SGLQATEPLP SRDSSESKSV TPEATSRRFQ LNGIDLNNTY DDSQDYLENL 360 GNSHVPASPR TASLGFSSWM QRDSHKSSPP QTSGNSDLTS TQSPSSSSGE AQSRTDRIVF 420 KLFGKDPNDL PFILRSQILD WLSHSPTDIE SYIRPGCIIL TIYLRLEKST WEELCCHLGS 480 SLKALLDAAD DPFWRTGWVY TRVQHFVTFT YNGQVVLDTP LPLKSDKSCR ISYIKPIAVS 540 VSERAQFVVK GFNLSHSATR LLCALEGKYL VQETCYDMMD GVHTTVEHDE LQCLKFSCSI 600 PDVTGRGFIE VEDHGLSSSF FPFIVAEQEV CSEICMLEGE IEVAESADAE KLEAKNQALD 660 FIHELGWLLH RSRAKFRLGH SDPNLDLFPF SRFRLLMEFS IEHDWCVVVK KLLGILFEGT 720 VDAGEHTSIE FALLDMSLLH RAVRRNCRSM VEFLLKFIPN QGLTGSEQKQ QVDRDGNSFL 780 FKPDAVGPMG LTPLHVAASA DGYGHVLDAL TDDPGKLGIE AWKNARDSTG LTPYDYACLQ 840 SRYSYVHLVQ RKISKTLESG QVVLDIPGVI LDTNGKQKQS EAYKPSRIAS LETEKIEMKA 900 ILRHCKLCAQ KPAYGNTRSL VYRPAMLSMV AVAAVCVCVA LLFKSTPEVL FVFQPFRWEL 960 LKFGSS

Sequence ? help Back to Top

Protein Sequence Length: 966 aa Download sequence

MEAEFGGKAH SYYGMKAVGK KSFEWDLNDW KWDGDLFTAS PLNSVPSACR SKQLFPVRPE  60
TPSNAVHDEA GSLNLNLGGQ AYPIMEGEVQ TGKKTKIVGT TSNRAVCQVE DCKADLSNAK  120
DYHRRHKVCD MHSKASTALV GNAMQRFCQQ CSRFHVLQEF DEGKRSCRRR LAGHNRRRRK  180
THPDTTANGG SLNDERGSSY LLISLLRILS NMHSTSSDQT KDQDLLSHLL RSLANLAGTA  240
DGRNISTLLQ GSQGLFNSGT SVQITKVPDM DDGVNLEDLR PVGQCSVVPA SDMLERRISS  300
VDDPGSLQVL SGLQATEPLP SRDSSESKSV TPEATSRRFQ LNGIDLNNTY DDSQDYLENL  360
GNSHVPASPR TASLGFSSWM QRDSHKSSPP QTSGNSDLTS TQSPSSSSGE AQSRTDRIVF  420
KLFGKDPNDL PFILRSQILD WLSHSPTDIE SYIRPGCIIL TIYLRLEKST WEELCCHLGS  480
SLKALLDAAD DPFWRTGWVY TRVQHFVTFT YNGQVVLDTP LPLKSDKSCR ISYIKPIAVS  540
VSERAQFVVK GFNLSHSATR LLCALEGKYL VQETCYDMMD GVHTTVEHDE LQCLKFSCSI  600
PDVTGRGFIE VEDHGLSSSF FPFIVAEQEV CSEICMLEGE IEVAESADAE KLEAKNQALD  660
FIHELGWLLH RSRAKFRLGH SDPNLDLFPF SRFRLLMEFS IEHDWCVVVK KLLGILFEGT  720
VDAGEHTSIE FALLDMSLLH RAVRRNCRSM VEFLLKFIPN QGLTGSEQKQ QVDRDGNSFL  780
FKPDAVGPMG LTPLHVAASA DGYGHVLDAL TDDPGKLGIE AWKNARDSTG LTPYDYACLQ  840
SRYSYVHLVQ RKISKTLESG QVVLDIPGVI LDTNGKQKQS EAYKPSRIAS LETEKIEMKA  900
ILRHCKLCAQ KPAYGNTRSL VYRPAMLSMV AVAAVCVCVA LLFKSTPEVL FVFQPFRWEL  960
LKFGSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein