PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g386910.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 366aa MW: 39816.7 Da PI: 5.878 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105.9 | 2e-33 | 206 | 264 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++prsYYrCt+a C vkk+vers++dp++v++tYeg+H+h+ Pd.00g386910.m01 206 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTAACGVKKRVERSSDDPSTVVTTYEGQHTHP 264 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence |
MDGRETGELK TTIDQISMAN STVFSDEIIP GSSFASFASS GGSIFDMSDN NQRGSGFMDL 60 LGFQDFNMPP SLFDFSSSQT TSSSSSMMMV MMPPHHQQQQ QPPLASPAST PTAVALPERE 120 STTSEVLNGS TAPTTPNSSS ISSSSNEAAA NKNEDQTTTK AQDEEADEQN QDPEKTQKQL 180 KPKKKNQKRQ REPRFAFMTK SEVDNLDDGY RWRKYGQKAV KNSPYPRSYY RCTTAACGVK 240 KRVERSSDDP STVVTTYEGQ HTHPSPITPR GTMGIAPLPD QPCAFSSSPF GVQHSAPSLN 300 ISSPAYGGGA FNPSSFSTGL LQERYNFGSP SSSSSAASNL LRDHGLLQDI VPQIRKEAKE 360 EDHLHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49520.1 | 6e-52 | WRKY family protein |