PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g384190.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 215aa MW: 24713.2 Da PI: 10.3772 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.3 | 1.3e-18 | 65 | 119 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q + Lee F ++++++ ++++ LA++l+L++rqV vWFqNrRa+ k Pd.00g384190.m01 65 RKKLRLTKDQSTLLEESFSRHSTLNPARKQSLAEQLNLKQRQVEVWFQNRRARTK 119 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 111.9 | 4.3e-36 | 65 | 153 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+k+q++lLEesF+++++L+p rK++la++L+l++rqv+vWFqnrRARtk+kq+E+d+e+ k+++ +l +en+rL+ke +eL+ + Pd.00g384190.m01 65 RKKLRLTKDQSTLLEESFSRHSTLNPARKQSLAEQLNLKQRQVEVWFQNRRARTKLKQTEVDCEFWKKRCGSLGDENRRLKKELQELK-S 153 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MRKKENPLVC LDLSFALCPK QQVASLGDRM ENRSSLRAMD EDEENERSIG TNNKSIIMNN 60 KNGVRKKLRL TKDQSTLLEE SFSRHSTLNP ARKQSLAEQL NLKQRQVEVW FQNRRARTKL 120 KQTEVDCEFW KKRCGSLGDE NRRLKKELQE LKSLNKNGAS PLYIQIPKAT MLSMCPSCER 180 MVKAHHHDQA AAKNTEDLNV VRKSNKLQGG FDGTN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 114 | 122 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 3e-53 | HD-ZIP family protein |