PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g383900.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 284aa MW: 30852.9 Da PI: 10.5227 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.4 | 2.2e-31 | 212 | 270 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+++dp+++++tYegeH+h+ Pd.00g383900.m01 212 SDDFSWRKYGQKPIKGSPYPRGYYKCSSVrGCPARKHVERAQDDPTMLVVTYEGEHRHP 270 69*************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MAIDLVGFSR MDDRTAMEEA ASAGLQSMDH LIRVLSNQNP SQTQTQTPLD CREITDLTVS 60 KFKQLISVLN RTGHARFRRG PANQSSTPVQ PVQPKPQTTS SAFSVPKSNN DDSLTLSPPI 120 STTSSFLSSI TIGDGSVSNG KAISSILAPP APAFSAGKPP LSQSHRKRCH DNDVAAKTSS 180 SGRCHCSKRR KSKVKRTIRV PAISSKIADI PSDDFSWRKY GQKPIKGSPY PRGYYKCSSV 240 RGCPARKHVE RAQDDPTMLV VTYEGEHRHP HPSITAGSVG LVFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 1e-88 | WRKY family protein |