PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g382680.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 311aa MW: 33630 Da PI: 8.9715 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.9 | 1.7e-20 | 37 | 87 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y GVr+++ +grWvAeI+d s +r r +lg+++t+eeAa+a+++a+++l+ge Pd.00g382680.m01 37 RYVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 87 699******.7*********43...36**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 311 aa Download sequence |
MAGPEVFTKT TAATSSPTNN KTMVTKSPST TKTALRRYVG VRQRPSGRWV AEIKDSSQRV 60 RLWLGTYDTP EEAARAYDEA ARALRGENAR TNFVSPGPAT NPNSSPLVSS VSNGGFMSGS 120 DGRHSGTGGL SFSSLKAKLS KNLQSIMARS SDHNKSSKSR VSDHFTFANI FHFRKYQYQN 180 PINPLIDMKN IEKVVQPSII VPHNGEGSTS TEPSSWESSS VSDCSAEWAH GFRQAGVDSE 240 GSEIGEGNIM DQIMGWIDSP DNQMGSRISV GDDDSEEGSR SKRFKVSSSV MVPPTFSTGS 300 PFNNINGETS N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G19790.1 | 8e-16 | ERF family protein |