PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g381390.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 381aa MW: 42617.1 Da PI: 6.8855 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.4e-16 | 156 | 201 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ Pd.00g381390.m01 156 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 201 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 54.5 | 2.7e-17 | 208 | 251 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+++l +a++ +G++ W+ Iar ++ gRt++ +k++w+ Pd.00g381390.m01 208 RRAFTEEEEDRLMQAHRVYGNK-WAMIARLFP-GRTDNAVKNHWHV 251 678*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence |
MANNGAIYVT ENPNAFSCFS SAPSFSSSSP SCSMGMVYAD MGSLSLSSNY GVVSSVSSQE 60 SSYISKLSEV ENGRGFWGFP PMGNCNNRSS EDYHHNTDIG DGKGSDSSSD HESGENNQTC 120 MNDQKANLIN HEKYPNENVV IGGKETESGQ SKHCARGHWR PAEDSKLKEL VALYGPQNWN 180 LIAEKLEGRS GKSCRLRWFN QLDPRINRRA FTEEEEDRLM QAHRVYGNKW AMIARLFPGR 240 TDNAVKNHWH VIMARKYREQ SSAYRRRKLS QTVYRRMEED PSFNVSRSTE PPSYCTLNLP 300 PNGGLSNSTL SPFPYGTSYN GVVGCGVDYY GSNGSPNMIS AEEEETIPSK KVLPFEFFPG 360 MSFRIPHYLS HDSFCSCIFG F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 6e-76 | MYB family protein |