PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g379980.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 78aa MW: 9555.03 Da PI: 9.8205 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.8 | 2.8e-09 | 2 | 44 | 8 | 47 |
HHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 E++ l +v+++G g+Wk I + + Rt+ ++k++w++ Pd.00g379980.m01 2 EEDTLRTGVQKYGAGNWKFILNSYReifEERTEVDLKDKWRNM 44 8999*************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 78 aa Download sequence |
LEEDTLRTGV QKYGAGNWKF ILNSYREIFE ERTEVDLKDK WRNMTRQRKQ GQLQSFEMRK 60 NELYKSMYFL LMLVQAIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15720.1 | 7e-11 | MYB_related family protein |