PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g376630.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 530aa MW: 57541.1 Da PI: 8.5419 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.4 | 1e-14 | 302 | 351 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Pd.00g376630.m01 302 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 351 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 530 aa Download sequence |
MSTGDSKVVL VTGCAKGGIG YEYCKAFAEQ NCRVFATDIS QRMHDIDLNS SDNIEALELD 60 VSSDESVALA VKTVMSKYGR IDVLVNNAGI GSTGPLAELP LETIRRAWEI NTLGQLRVVQ 120 QVVPYMASRR SGSIVNIGSV VGKVPTPWAG SYCASKAAVH AMSNTLRVEL KPFGIDVVLV 180 VPGAVRSNFG SATVERLGGH DWKLYKDFKE AIAERARASQ GSKATDASVF ARHVANKVLG 240 PKPPKLISFG HMTGLFAVLS CSPLWLENYQ KELEDMKNMT RQEYVAHLRR KSSGFSRGAS 300 MYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR GLNAVTNFDI 360 TRYDVDRIMA SNTLLAGELA KRNKETAPVN EAATNQNHVA QTSNGEAIVS LKNINEGEDW 420 KMALYQSSQQ LDQKQPSTEP HNAIQAEAED SGKMGAAHVS NASSLVTSLS SSREGSPDKS 480 CLPSFFGMPP AASKFFTSSS DTVSSWIPTV QSRPGLTMPH MPIFAAWTDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 6e-68 | AP2 family protein |