PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g375610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 374aa    MW: 39725.5 Da    PI: 8.5702
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g375610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.91.2e-392787262
            zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                      +e++lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+++
  Pd.00g375610.m01 27 PEQSLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKRVR 87
                      68999*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MMSSDNTPPG KPPPGTKGGA KQQHPPPEQS LKCPRCDSPN TKFCYYNNYS LTQPRHFCKT  60
CRRYWTKGGA LRNVPIGGGC RKNKRVRSSS SNSRISCSLD SKDSAGSSSS ENMMLGGLKF  120
FHGISPAMDF QLGGLSSLPS RLHHNPSSGI SYNNNNNQFS AFGDVSGTSG LTISTPLDTS  180
ASCNSFLGFN YPLTLGGGGG GGAGGGGDGF SATQNMMSSM NVHSSLASSI ESLSSINQDL  240
HWKLQQQRLA MLFGSGNDHD QSTQTTQSQL EQQQKTQQIA PISLFQNLEV SSKADHQHQH  300
QVVGTHGRRE GASASGDTAT EWFFGNSYAP PVTPTPTNSG GGNGGGGGNE NTSNWQHGIQ  360
AWSSHDLQQY NALP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.17e-48Dof family protein