PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g373370.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 175aa    MW: 19794.9 Da    PI: 8.7774
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g373370.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.61.3e-4153130178
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       +Cq+++C adls+ak+yhrrhkvC+ hska+vvlvsgl+qrfCqqCsrfhel efD++krsCrrrLa+hnerrrk++ 
  Pd.00g373370.m01  53 CCQADRCPADLSDAKQYHRRHKVCDLHSKAQVVLVSGLRQRFCQQCSRFHELPEFDDTKRSCRRRLAGHNERRRKNSV 130
                       6**************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MEKPHVVVKE EEEEDEEFDH HQQPEDHDKK QKGIVGGSGS VKRSGTSGGG TRCCQADRCP  60
ADLSDAKQYH RRHKVCDLHS KAQVVLVSGL RQRFCQQCSR FHELPEFDDT KRSCRRRLAG  120
HNERRRKNSV ESNAEGPSRT GAGTQLKDVC GQGDNSGRIR ITIQGNSTYK HFQIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.14e-47SBP family protein