PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g373370.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 175aa MW: 19794.9 Da PI: 8.7774 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.6 | 1.3e-41 | 53 | 130 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+++C adls+ak+yhrrhkvC+ hska+vvlvsgl+qrfCqqCsrfhel efD++krsCrrrLa+hnerrrk++ Pd.00g373370.m01 53 CCQADRCPADLSDAKQYHRRHKVCDLHSKAQVVLVSGLRQRFCQQCSRFHELPEFDDTKRSCRRRLAGHNERRRKNSV 130 6**************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MEKPHVVVKE EEEEDEEFDH HQQPEDHDKK QKGIVGGSGS VKRSGTSGGG TRCCQADRCP 60 ADLSDAKQYH RRHKVCDLHS KAQVVLVSGL RQRFCQQCSR FHELPEFDDT KRSCRRRLAG 120 HNERRRKNSV ESNAEGPSRT GAGTQLKDVC GQGDNSGRIR ITIQGNSTYK HFQIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 4e-47 | SBP family protein |