PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g372570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 308aa    MW: 34547.3 Da    PI: 6.508
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g372570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.55.5e-28114174259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dg++WrKYGqK++ g+++prsYYrCt++   +C ++k+v+rs+edp+++eitY+g+H+++
  Pd.00g372570.m01 114 EDGHSWRKYGQKDILGTKHPRSYYRCTYRntqSCYATKQVQRSDEDPTIFEITYKGKHTCS 174
                       8***************************98889**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MEGMELAKQL RLSLSAASSS DTRQFLVQRI LSSYEKALLI LNFSGPAQST AGAIASVPES  60
LVSANAGPCF DDYNKSPKDH HDLTDVSKKR KIMAKWTDHV MRVSSENGIE GPHEDGHSWR  120
KYGQKDILGT KHPRSYYRCT YRNTQSCYAT KQVQRSDEDP TIFEITYKGK HTCSHGSNSV  180
LPPPSPEQQE QKRNKQNNTS HQQQSQGNQM SFPTNLRVDT KFLEDRENMA SPFSFTSTSF  240
GCESNYYLMP PSQMRNIAGN EQLSECGHTE IISANNSSTN SPIPDMDFPL EPVEIEPNFP  300
FDTTGIFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-52WRKY family protein