PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g372480.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 324aa MW: 36361.3 Da PI: 6.1292 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 88.4 | 5.9e-28 | 130 | 190 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK++ g+++prsYYrCt++ +C ++k+v+rs+edp+++eitY+g+H+++ Pd.00g372480.m01 130 EDGHSWRKYGQKDILGTKHPRSYYRCTYRntqSCYATKQVQRSDEDPTIFEITYKGKHTCS 190 8***************************98889**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MDSSESWEHK SLLTEIMEGM ELAKQLRLSL SAASSSDTRQ FLVQRILSSY EKALLILNFS 60 GPAQSTAGAI ASVPESLVSA NAGPCFDDYN KSPKDHHDLT DVSKKRKIMA KWTDHVMRVS 120 SENGIEGAHE DGHSWRKYGQ KDILGTKHPR SYYRCTYRNT QSCYATKQVQ RSDEDPTIFE 180 ITYKGKHTCS HGSNSVLPPP SPEQQEQKRN KQNNTSHQQQ SQGNQMSFPT NLRVDTKLLE 240 DRENMASPFS FTSTSFGCES NYYLMPPSQM RNIAGNEQLS ECGHTEIISA NNSSTNSPIP 300 DMDFPLEPVE IEPNFPFDTT GIFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 5e-57 | WRKY family protein |