PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g371650.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 991aa MW: 109151 Da PI: 5.2432

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g371650.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5.2e-29	591	642	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCR++GI+RWP+Rkik++ Pd.00g371650.m01 591 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRHHGISRWPSRKIKKV 642 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 991 aa Download sequence
MVEPEEESRT QAIPPKSKNI VDDREAALME FDLDLDAFWP LDPIHFPSNP TSPPLFSSTD 60 QPCSPSWGFP DGDADNDDKL AGQVDQALSD RPQFSSCIPD PGREIPRENE DRRMLTSPFL 120 GLEPVENPDA YCLIKEKITQ ALRQLKELTD QHVLAQVWAP VKNGGRYVLT TSGQPFVLDP 180 HTNGLHQYRI ASLMYMFSVD GESDGMLGLP GRVFQQKLPE WTPNVQYYSI KEYPRLGHAQ 240 HYNVQGTLAL PVFEPSGRTC VGVLELIMTS PKINYASEVD KVCKALEAVS LKSSEILDHT 300 SMQIQICNEG RQTALTEILE ILTVVCETHK LPLAQTWVPC MHRNVLAYGG GLKKSCTSFD 360 GSCMEQVCMS TTDAAFYIVD APMWHFRAAC VEHHLQKGQG VAGRAFLSRN ACFCRDITQF 420 CKTDYPLVHY ARMFKLTSCF AICLQSTHTG NDDYILEFFL PPSITDSYEQ RTLLGSLLAI 480 IKNHFQSLKV ASGIILEEEG LVEMVQASTN RGLDSRLECI RIPRSAETPP GPALPNGEEM 540 VQLDSSKPQL MVDFDPANDG SNAVNEGGEN NISCPENKDI KKKSEKKRGK AEKSISLEVL 600 QQYFAGSLKD AAKSLGVCPT TMKRICRHHG ISRWPSRKIK KVNHSLSKLQ RVIESVQGAE 660 GAFGLTSFTA SPRSGAVGSI SRPYILNGSN QQSSPSSKPS ELHGEKKDSP TPTTPGKEGQ 720 AWIENQLLDG GILSQEELLL EHGRFLLDDG KGSNTSKTGS SSREASAGTP TSHGSCQGSP 780 ANGNELVNNP FVPSIHDRCI EVNGFPESAV RPPKEPNLSF ACSMPDVVLM TDPEEPCRGM 840 LIEDAGSSKD LKNLCPQVDA MVDEQVPEAC CTNPPCSDSA LKPSNTMPHI IARQEMKSVT 900 IKATYKEDII RFRISMSSGI VELKDEVAKR LKLEMGTFDI KYVDDDLEWV LVACDADLQE 960 CMEICRSLGI KMIRLSVHDI MSNFGSSCGS M

Sequence ? help Back to Top

Protein Sequence Length: 991 aa Download sequence

MVEPEEESRT QAIPPKSKNI VDDREAALME FDLDLDAFWP LDPIHFPSNP TSPPLFSSTD  60
QPCSPSWGFP DGDADNDDKL AGQVDQALSD RPQFSSCIPD PGREIPRENE DRRMLTSPFL  120
GLEPVENPDA YCLIKEKITQ ALRQLKELTD QHVLAQVWAP VKNGGRYVLT TSGQPFVLDP  180
HTNGLHQYRI ASLMYMFSVD GESDGMLGLP GRVFQQKLPE WTPNVQYYSI KEYPRLGHAQ  240
HYNVQGTLAL PVFEPSGRTC VGVLELIMTS PKINYASEVD KVCKALEAVS LKSSEILDHT  300
SMQIQICNEG RQTALTEILE ILTVVCETHK LPLAQTWVPC MHRNVLAYGG GLKKSCTSFD  360
GSCMEQVCMS TTDAAFYIVD APMWHFRAAC VEHHLQKGQG VAGRAFLSRN ACFCRDITQF  420
CKTDYPLVHY ARMFKLTSCF AICLQSTHTG NDDYILEFFL PPSITDSYEQ RTLLGSLLAI  480
IKNHFQSLKV ASGIILEEEG LVEMVQASTN RGLDSRLECI RIPRSAETPP GPALPNGEEM  540
VQLDSSKPQL MVDFDPANDG SNAVNEGGEN NISCPENKDI KKKSEKKRGK AEKSISLEVL  600
QQYFAGSLKD AAKSLGVCPT TMKRICRHHG ISRWPSRKIK KVNHSLSKLQ RVIESVQGAE  660
GAFGLTSFTA SPRSGAVGSI SRPYILNGSN QQSSPSSKPS ELHGEKKDSP TPTTPGKEGQ  720
AWIENQLLDG GILSQEELLL EHGRFLLDDG KGSNTSKTGS SSREASAGTP TSHGSCQGSP  780
ANGNELVNNP FVPSIHDRCI EVNGFPESAV RPPKEPNLSF ACSMPDVVLM TDPEEPCRGM  840
LIEDAGSSKD LKNLCPQVDA MVDEQVPEAC CTNPPCSDSA LKPSNTMPHI IARQEMKSVT  900
IKATYKEDII RFRISMSSGI VELKDEVAKR LKLEMGTFDI KYVDDDLEWV LVACDADLQE  960
CMEICRSLGI KMIRLSVHDI MSNFGSSCGS M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein